Dr.
Thomas Lesley Sitter

Computational Biology, Molecular Biology, Microbiology

lesleysitter (at) hotmail.com

Prager Strasse 53
Leipzig, Germany

BIO

I obtained my PhD in October of 2020 from Lincoln University in New Zealand. In December of 2020 I joined the Molecular Palaeopathology group at the Max Planck Institute for Evolutionary Anthropology, where we worked on ancient DNA, DNA molecules extracted from archeological remains. These molecules tend to be fragmented and have high amounts of deaminated cytosines, creating some computational challenges. This work has resulted in some exciting findings regarding several human pathogens such as the Treponema pallidum and Mycobacterium lepromatosis. I’ve also developed a new tool called DamageMasker that “masks” deaminated cytosines from mapping data, so as to reduce the overal noise that damage adds to genotyping data.

I have spend the majority of his life working on foundational evolutionary questions. I worked with plant, mammal and microbial systems both in a molecular lab and computationally. My primary interest are to understand evolutionary drivers, both internal and external (parasites, global warming, habitat loss) and how they create loss and gain of speciation. 

DEGREES

PhD. in Computational Biology, Microbiology
Lincoln University, New Zealand. Jun 2016 – July 2020

M.Sc. in Computer Science, Bioinformatics
Vrije Universiteit, The Netherlands. Sept 2013 – June 2015

B.ASc. in Biochemistry, Molecular Biology
InHolland, The Netherlands. Sept 2006 – June 2012